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Development and validation of a biology-based novel therapeutic agent targeting the LIN28/ <i>let-7</i> pathway in cancer.

2025· article· en· W4410822229 on OpenAlexaff
Patrick Sipila, Yusheng Zhao, N. Susan, Ashley Plant, Aru Narendran

Bibliographic record

VenueJournal of Clinical Oncology · 2025
Typearticle
Languageen
FieldImmunology and Microbiology
TopicToxin Mechanisms and Immunotoxins
Canadian institutionsAlberta Children's HospitalUniversity of Calgary
Fundersnot available
KeywordsMedicineCancerCancer researchComputational biologyOncologyInternal medicineBiology

Abstract

fetched live from OpenAlex

3114 Background: Currently, brain tumors that are diagnosed in infants and young children carry an exceptionally high risk for treatment resistance and toxicities. The LIN28 family of RNA-binding proteins regulate stem cell biology and pluripotency. In addition to embryonic development, they have also been implicated in oncogenesis through interaction with the tumor suppressor micro-RNA (miRNA), let-7 . In cancer, LIN28 expression leads to let-7 loss-of-function, oncogenic activation, and tumorigenesis. Importantly, LIN28 expression has been associated with stemness and subsequent tumor aggressiveness and poor survival in early childhood brain tumors. Thus, LIN28 may offer an effective therapeutic strategy to prevent relapse by specifically targeting cancer stem cells. In this study, we describe a novel therapeutic inhibitor of LIN28 in cancer. Methods: Using an in silico approach, we designed and synthesized a panel of novel compounds predicted to bind and inhibit the critical molecular interaction between LIN28 and let-7 . Cytotoxicity was evaluated by alamar blue viability assay in a panel of LIN28-positive cancer cell lines derived from atypical teratoid rhabdoid tumor (ATRT), embryonal tumor with multilayered rosettes (ETMR), and germ cell tumor. LIN28-negative cells were used as control. LIN28 protein expression and let-7 miRNA levels were determined by immunoblot and reverse transcription quantitative polymerase chain reaction (RT-qPCR), respectively. Self-renewal capacity was analyzed by sphere formation assay. Mice carrying xenografts were treated to investigate LIN28 inhibition in vivo . Results: Preliminary screening of small molecule inhibitors identified a lead compound, designated THNB-3, that induces cell death at micromolar concentrations in LIN28-positive cell lines established from various tumors, without affecting LIN28-negative controls. Treatment with THNB-3 increased the level of let-7 tumor suppressor, confirming effective inhibition of LIN28. In addition to cytotoxicity, THNB-3 significantly inhibited sphere formation in brain tumor cells, reducing self-renewal and multipotency of cancer stem cells. Lastly, the anticancer activity of THNB-3 was validated in vivo against LIN28-positive xenografts and the drug also demonstrated systemic tolerability in mice. Conclusions: Our studies provide the first evidence for an effective, targeted therapeutic agent against the LIN28/ let-7 pathway for the treatment of cancer in the future. THNB-3 selectively induces cytotoxicity in LIN28-positive cancers by restoring let-7 miRNA, confirming effective target modulation. Further, LIN28 inhibition by THNB-3 may reduce self-renewal and multipotency of cancer stem cells. Together, our preclinical data supports further development of THNB-3 for the treatment of high-risk LIN28-positive tumors.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.539
Threshold uncertainty score0.347

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0040.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.089
GPT teacher head0.399
Teacher spread0.309 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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