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Record W4412695745 · doi:10.1099/jgv.0.002114

Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses from the Plant Viruses Subcommittee, 2025

2025· article· en· W4412695745 on OpenAlexaff
Luisa Rubino, Peter Abrahamian, Wenxia An, Miguel A. Aranda, José Trinidad Ascencio‐Ibáñez, Nicolás Bejerman, Arnaud G. Blouin, Thierry Candresse, Tomás Canto, Mengji Cao, John P. Carr, Won Kyong Cho, Fiona Constable, Indranil Dasgupta, Humberto Debat, Ralf G. Dietzgen, M. Digiaro, Livia Donaire, Toufic Elbeaino, Denis Fargette, Fiona Filardo, Matthias Fischer, Núria Fontdevila Pareta, Adrian Fox, Juliana Freitas‐Astúa, Marc Fuchs, Andrew D. W. Geering, Mahan Ghafari, Anders Hafrén, John Hammond, Rosemarie W. Hammond, Beata Hasiów‐Jaroszewska, Eugénie Hébrard, Carmen Hernández, Ahmad Hosseini, Roger Hull, Alice K. Inoue‐Nagata, R. Jordan, Hideki Kondō, Jan Kreuze, Mart Krupovìč, Kenji Kubota, Jens H. Kuhn, Scott Leisner, Jean‐Michel Lett, Chengyu Li, Fan Li, Junmin Li, Paola M. López-Lambertini, Juan José López‐Moya, François Maclot, Kristiina Mäkinen, Darren P. Martin, Sébastien Massart, W. Allen Miller, Musa Mohammadi, Dimitre Mollov, Emmanuelle Muller, Tatsuya Nagata, Jesús Navas‐Castillo, Yutaro Neriya, Francisco M. Ochoa‐Corona, Kazusato Ohshima, Vicente Pallás, H. R. Pappu, Karel Petrzik, Mikhail M. Pooggin, Maria Isabella Prigigallo, Pedro Luis Ramos‐González, Simone G. Ribeiro, Katja R. Richert‐Pöggeler, Philippe Roumagnac, Avijit Roy, Sead Sabanadzovic, Dana Šafářová, Pasquale Saldarelli, Hélène Sanfaçon, Cecilia Sarmiento, Takahide Sasaya, Kay Scheets, Willem E. W. Schravesande, Susan Seal, Yoshifumi Shimomoto, Merike Sõmera, Livia Stavolone, Lucy R. Stewart, Pierre‐Yves Teycheney, John E. Thomas, Jeremy R. Thompson, Antonio Tiberini, Yasuhiro Tomitaka, Ioannis E. Tzanetakis, Marie Umber, Cica Urbino, Harrold A. van den Burg, R.A.A. van der Vlugt, Arvind Varsani, Adriaan Verhage, D. E. V. Villamor, Susanne von Bargen, Peter J. Walker, Thierry Wetzel, Anna E. Whitfield, Stephen J. Wylie, Caixia Yang, F. Murilo Zerbini, Song Zhang

Bibliographic record

VenueJournal of General Virology · 2025
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Virus Research Studies
Canadian institutionsAgriculture and Agri-Food Canada
FundersNational Institute of Allergy and Infectious DiseasesNational Institute of General Medical SciencesNational Institutes of Health
KeywordsBiologySubgenusTaxonomy (biology)RatificationMandateTaxonVirus classificationVirologyZoologyEcologyLawPolitical scienceGenetics

Abstract

fetched live from OpenAlex

In March 2025, following the annual International Committee on Taxonomy of Viruses (ICTV) ratification vote, newly proposed taxa were added to those under the mandate of the Plant Viruses Subcommittee. In brief, 1 new order, 3 new families, 6 new genera, 2 new subgenera and 206 new species were created. Some taxa were reorganized. Genus Cytorhabdovirus in the family Rhabdoviridae was abolished and its taxa were redistributed into three new genera Alphacytorhabdovirus, Betacytorhabdovirus and Gammacytorhabdovirus. Genus Waikavirus in the family Secoviridae was reorganized into two subgenera (Actinidivirus and Ritunrivirus). One family and four previously unaffiliated genera were moved to the newly established order Tombendovirales. Twelve species not assigned to a genus were abolished. To comply with the ICTV mandate of a binomial format for virus species, eight species were renamed. Demarcation criteria in the absence of biological information were defined in the genus Ilarvirus (family Bromoviridae). This article presents the updated taxonomy put forth by the Plant Viruses Subcommittee and ratified by the ICTV.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.026
metaresearch head score (Gemma)0.034
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.058
Threshold uncertainty score0.140

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0260.034
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0080.007
Science and technology studies0.0040.001
Scholarly communication0.0070.003
Open science0.0040.002
Research integrity0.0040.008
Insufficient payload (model declined to judge)0.0050.005

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.101
GPT teacher head0.280
Teacher spread0.179 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2025
Admission routes1
Has abstractyes

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Same venueJournal of General VirologySame topicPlant Virus Research StudiesFrench-language works237,207