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Record W4416084814 · doi:10.1093/neuonc/noaf201.0077

ANGI-11. MESENCHYMAL STEM CELLS AND PERIVASCULAR STROMA ARE ASSOCIATED WITH MICROVASCULAR PROLIFERATION, IMMUNOSUPPRESSION, AND POOR OUTCOME IN GLIOMA

2025· article· en· W4416084814 on OpenAlexaff
Candice C. Poon, Shelley M. Herbrich, Yulong Chen, Anwar Hossain, Gregory N. Fuller, Sonali Jindal, Sreyashi Basu, Daniel Ledbetter, Marc Macaluso, Lynette M. Phillips, Joy Gumin, Zhong He, Brittany C. Parker Kerrigan, Sanjay K. Singh, Pratishtha Singh, Mohammed Fayyad Zamen, Derek Ng Tang, Sangeeta Goswami, Frederick F. Lang, Padmanee Sharma

Bibliographic record

VenueNeuro-Oncology · 2025
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicSingle-cell and spatial transcriptomics
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsMesenchymal stem cellPDGFRBStromal cellGliomaTranscriptomeImmune systemCD34Stem cellSingle-cell analysisGene signature

Abstract

fetched live from OpenAlex

Abstract INTRODUCTION Microvascular proliferation (MVP) is a hallmark of glioblastoma (GBM) and other World Health Organization (WHO) grade 4 gliomas. MVP is also a poor prognostic marker in various solid tumors. Despite its clinical importance, the biological underpinnings of MVP are controversial and remain unclear, especially at the single cell level. METHODS In this study, we perform single cell RNA-sequencing (scRNA-seq) on paired CD45-CD105+ vascular/perivascular stromal cells (PVSCs) and CD45+CD105± immune cells from 16 primary glioma patient samples (7 glioblastomas, 4 astrocytomas, and 5 oligodendrogliomas for a total of 76,141 cells), both with and without MVP. scRNA-seq was complemented with spatial transcriptomic and multiplex immunofluorescence assays. RESULTS These analyses revealed the presence of developmentally-related mesenchymal stem cells (MSCs) alongside cancer-associated fibroblasts (CAFs), pericytes, fibromyocytes, and smooth muscle cells within the CD45-CD105+ compartment. RNA velocity (trajectory) analysis identified PDGFRB as a putative driver gene guiding MSCs towards more mature PVSCs. Signaling network analyses and digital spatial profiling uncovered interactions between PDGFRB+ PVSCs and immunosuppressive myeloid cell subsets enriched in the perivascular niche, suggesting targetable receptor-ligand interactions. Additionally, a gene signature of MVP-associated PVSCs predicted worse prognosis in glioma and multiple other solid tumors. DISCUSSION This study provides a novel transcriptomic cell atlas of PVSCs and immune cells in glioma, helping to refine the biological model of MVP which has traditionally focused on endothelial cells. PDGFRβ+ PVSC-associated MVP is linked to immunosuppression, offering a chance for exploitation via PDGFRβ inhibitors. Furthermore, our data suggests MSCs, potentially from the periphery, may play a role colonizing the glioma perivascular niche and contributes to MVP, supporting future investigation of systemic treatments.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.126
Threshold uncertainty score0.858

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.238
Teacher spread0.227 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2025
Admission routes1
Has abstractyes

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