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Record W593268778

BUTYRATE REDUCES FREE CHOLESTEROL ACCUMULATION IN NIEMANN-PICK DISEASE TYPE C1 CELLS (NOVA SCOTIA FORM) THROUGH THE INDUCTION OF ACID SPHINGOMYELINASE

2012· article· en· W593268778 on OpenAlexaboutno aff
Chikako Oyama, Masashi Hirayama, Atsuko Noguchi, Hirokazu Arai, Tsutomu Takahashi

Bibliographic record

VenueInstitutional Repositories DataBase (IRDB) · 2012
Typearticle
Languageen
FieldMedicine
TopicLysosomal Storage Disorders Research
Canadian institutionsnot available
Fundersnot available
KeywordsNPC1Acid sphingomyelinaseButyrateButyric acidNiemann–Pick disease, type CSphingomyelin phosphodiesteraseIntracellularSphingomyelinChemistrySandhoff diseaseLymphoblastBiochemistryCholesterolBiologyEnzymeCell culture
DOInot available

Abstract

fetched live from OpenAlex

Niemann-Pick disease type C (NPC) is an inherited disorder caused by mutations in either the NPC1 or the NPC2 gene that affect intracellular free cholesterol trafficking. Most cases of NPC have mutations in the NPC1 gene. Acid sphingomyelinase (ASM) is a lysosomal enzyme in which an inherited deficiency leads to Niemann-Pick disease types A and B (NPDA/NPDB). Despite having a normal ASM gene, NPC cells have a secondary defect in ASM activity ; the mechanism remains to be fully elucidated. Butyrate, one of the short chain fatty acids, is known as an inducer of ASM. We investigated the effects of butyrate on ASM activity and mRNA expression in normal and NPC1 mutant (Nova Scotia form ; NPC1^<Nova Scotia>) lymphoblasts. After incubation with 10 mM butyric acid for 24 h, ASM activity was significantly increased by 3.3- and 4.6-fold in normal and NPC1^<Nova Scotia> cells, respectively (p<0.01). The secondary defect of ASM activity in NPC1^<Nova Scotia> cells was restored to normal levels by treatment of 10 mM butyric acid. In quantitative RT-PCR analysis, butyric acid significantly increased ASM mRNA levels in both types of cells (p<0.01). In addition, we investigated the effects of butyrate on intracellular free cholesterol levels in NPC1^<Nova Scotia> lymphoblasts. Free cholesterol levels in cells treated with or without 10 mM butyric acid were 0.019±0.002 and 0.026±0.006 μg/μg protein, respectively, demonstrating that butyric acid significantly decreased free cholesterol levels in NPC1^<Nova Scotia> cells (p<0.05). To determine whether ASM induced by butyric acid is directly associated with the reduction of free cholesterol accumulation in NPC1^<Nova Scotia> cells, NPDB and NPC1^<Nova Scotia> fibroblasts were treated with 10 mM butyric acid and stained with filipin. We found that butyric acid dramatically reduced the accumulation of intracellular free cholesterol in NPC1^<Nova Scotia> cells, but it did not affect NPDB cells. These data suggest that ASM induced by butyrate is related to intracellular cholesterol trafficking and metabolism in NPC1^<Nova Scotia> cells. ASM inducers, such as butyrate, may reduce the accumulation of intracellular free cholesterol in NPC1^<Nova Scotia> cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.073
Threshold uncertainty score0.786

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.002
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.072
GPT teacher head0.350
Teacher spread0.278 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2012
Admission routes1
Has abstractyes

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