The genomic and transcriptomic architecture of 2,000 breast tumours reveals novel subgroups
2012· article· en· Nature· Biochemistry, Genetics and Molecular Biology
afffundno abstract
6,380
citations
Works
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10,000+ workspage 1
DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors
2019· article· en· Cell Systems· Biochemistry, Genetics and Molecular Biology
fundno affno abstract
4,592
citations
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
2008· article· en· Nature Genetics· Biochemistry, Genetics and Molecular Biology
affno abstract
4,023
citations
An anatomically comprehensive atlas of the adult human brain transcriptome
2012· article· en· Nature· Biochemistry, Genetics and Molecular Biology
affno abstract
3,317
citations
Genes that mediate breast cancer metastasis to lung
2005· article· en· Nature· Medicine
affno abstract
2,957
citations
A survey of best practices for RNA-seq data analysis
2016· review· en· Genome biology· Biochemistry, Genetics and Molecular Biology
afffund
2,886
citations
2,298
citations
Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression
2021· article· en· Nature Genetics· Biochemistry, Genetics and Molecular Biology
affno abstract
2,182
citations
A promoter-level mammalian expression atlas
2014· article· en· Nature· Biochemistry, Genetics and Molecular Biology
affno abstract
2,175
citations
Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells
2010· article· en· Science· Biochemistry, Genetics and Molecular Biology
afffund
2,109
citations
Nanopore sequencing and assembly of a human genome with ultra-long reads
2018· article· en· Nature Biotechnology· Biochemistry, Genetics and Molecular Biology
afffund
2,098
citations
Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R
2016· article· en· Bioinformatics· Biochemistry, Genetics and Molecular Biology
fundno aff
2,053
citations
The clonal and mutational evolution spectrum of primary triple-negative breast cancers
2012· article· en· Nature· Biochemistry, Genetics and Molecular Biology
affno abstract
2,026
citations
Transcriptomic analysis of autistic brain reveals convergent molecular pathology
2011· article· en· Nature· Biochemistry, Genetics and Molecular Biology
afffundno abstract
1,950
citations
The somatic mutation profiles of 2,433 breast cancers refine their genomic and transcriptomic landscapes
2016· erratum· en· Nature Communications· Biochemistry, Genetics and Molecular Biology
afffund
1,800
citations
Cells of the adult human heart
2020· article· en· Nature· Biochemistry, Genetics and Molecular Biology
afffund
1,771
citations
Personalized Gut Mucosal Colonization Resistance to Empiric Probiotics Is Associated with Unique Host and Microbiome Features
2018· article· en· Cell· Biochemistry, Genetics and Molecular Biology
fundno affno abstract
1,612
citations
The human transcriptome across tissues and individuals
2015· article· en· Science· Biochemistry, Genetics and Molecular Biology
aff
1,427
citations
Unifying the analysis of high-throughput sequencing datasets: characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysis
2014· article· en· Microbiome· Computer Science
afffund
1,413
citations
A single-cell transcriptomic atlas characterizes ageing tissues in the mouse
2020· article· en· Nature· Biochemistry, Genetics and Molecular Biology
affno abstract
1,321
citations
Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies
2018· article· en· BMC Bioinformatics· Biochemistry, Genetics and Molecular Biology
fundno aff
1,285
citations
Multiplexed droplet single-cell RNA-sequencing using natural genetic variation
2017· article· en· Nature Biotechnology· Biochemistry, Genetics and Molecular Biology
affno abstract
1,274
citations
Single-Cell Transcriptomic Analysis of Human Lung Provides Insights into the Pathobiology of Pulmonary Fibrosis
2018· article· en· American Journal of Respiratory and Critical Care Medicine· Medicine
fundno aff
1,274
citations
A genomic storm in critically injured humans
2011· article· en· The Journal of Experimental Medicine· Immunology and Microbiology
aff
1,223
citations
The sequence and de novo assembly of the giant panda genome
2009· article· en· Nature· Biochemistry, Genetics and Molecular Biology
aff
1,222
citations