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4,299,418 works, Canadian by any of four routes.

Every filter state is a URL; the URL is the query; the query is citable via /q/⟨hash⟩. The page, the API and the export parse the same parameters.

The current cohort, streamed from the database: every work column, the machine labels, the provisional scores, and the per-row validation status. Exports are capped at 100,000 rows. Mints a permanent /q/ link for this exact query. The same filters always produce the same link, whoever asks.

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Biomedical Text Mining and Ontologies
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Direct Codex and Gemma labels are unvalidated and sparse. Distilled predictions cover the full frame and are also unvalidated. Choose the evidence source explicitly; absence of a direct label is never a negative label.

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The four routes compose: require the funder route and exclude affiliation to get the funder-only stratum no affiliation-based frame ever sees.

1,581 results · 1 filter active ·
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20002025
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Machine labels · sparse coverage
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An unlabeled work is unknown, not a negative. Label coverage is reported on every query.
1,581 works in the cohort · of 4,299,418page 1 of 32

Labels cover 8 of 1,581 works in this cohort. The rest are unlabeled, which is not a negative label: the label table is sparse today and grows as labeling rounds land.

Distilled predictions cover 1,581 of 1,581 works in this cohort. Predictions are machine_predicted_unvalidated. The Gemma side is a direct model label for every work (title-only); the Codex side is a distilled, calibrated classifier. Candidate is the union; consensus is the intersection.

affunlabeled
The Human Phenotype Ontology in 2017
Sebastian Köhler, Nicole Vasilevsky, Mark Engelstad, Erin D. Foster, Julie A. McMurry, Ségolène Aymé +53 more
2016· review· en· Nucleic Acids Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
801
citations
afffundno abstractunlabeled
Bio2RDF: Towards a mashup to build bioinformatics knowledge systems
François Belleau, Marc-Alexandre Nolin, Nicole Tourigny, Philippe Rigault, Jean Morissette
2008· article· en· Journal of Biomedical Informatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
798
citations
affunlabeled
Toward interoperable bioscience data
Susanna‐Assunta Sansone, Philippe Rocca‐Serra, Dawn Field, Eamonn Maguire, Chris Taylor, Oliver Hofmann +43 more
2012· article· en· Nature Genetics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · metaresearch+open_scienceconsensus · none
468
citations
affunlabeled
The Ontology for Biomedical Investigations
Anita Bandrowski, Ryan R. Brinkman, Mathias Brochhausen, Matthew Brush, Bill Bug, Marcus C. Chibucos +38 more
2016· article· en· PLoS ONE· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
385
citations
affunlabeled
Controlled vocabularies and semantics in systems biology
Mélanie Courtot, Nick Juty, Christian Knüpfer, Dagmar Waltemath, Anna Zhukova, Andreas Dräger +21 more
2011· article· en· Molecular Systems Biology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
331
citations
afffundunlabeled
Modeling biomedical experimental processes with OBI
Ryan R. Brinkman, Mélanie Courtot, Dirk Derom, Jennifer Fostel, Yongqun He, Phillip Lord +10 more
2010· article· en· Journal of Biomedical Semantics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
286
citations
affunlabeled
The National Center for Biomedical Ontology
Mark A. Musen, Natalya F. Noy, Nigam H. Shah, Patricia L. Whetzel, Christopher G. Chute, Margaret-Anne Story +1 more
2011· article· en· Journal of the American Medical Informatics Association· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
280
citations
affunlabeled
Finding Our Way through Phenotypes
Andrew Deans, Suzanna Lewis, Eva Huala, Salvatore S. Anzaldo, Michael Ashburner, James P. Balhoff +67 more
2015· article· en· PLoS Biology· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
222
citations
afffundunlabeled
OntoFox: web-based support for ontology reuse
Zuoshuang Xiang, Mélanie Courtot, Ryan R. Brinkman, Alan Ruttenberg, Yongqun He
2010· article· en· BMC Research Notes· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
209
citations
affunlabeled
Linked open drug data for pharmaceutical research and development
Matthias Samwald, Anja Jentzsch, Christopher M. L. S. Bouton, Claus Stie Kallesøe, Egon Willighagen, Janos Hajagos +5 more
2011· article· en· Journal of Cheminformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · open_scienceconsensus · none
187
citations
affno abstractunlabeled
Significance, P values and t-tests
Martin Krzywinski, Naomi Altman
2013· article· en· Nature Methods· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · metaresearchconsensus · none
185
citations
affunlabeled
Literature review of SNOMED CT use
Dennis Lee, Nicolette F. de Keizer, Francis Lau, Ronald Cornet
2013· review· en· Journal of the American Medical Informatics Association· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
177
citations
affunlabeled
Post-publication sharing of data and tools
Paul N. Schofield, Tania Bubela, T. A. Weaver, Lili Portilla, Stephen D. Brown, John M. Hancock +4 more
2009· article· en· Nature· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · metaresearch+open_scienceconsensus · none
171
citations
affno abstractunlabeled
Patient similarity for precision medicine: A systematic review
Enea Parimbelli, Simone Marini, Lucia Sacchi, Riccardo Bellazzi
2018· review· en· Journal of Biomedical Informatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
163
citations
afffundno abstractunlabeled
A survey of SNOMED CT implementations
Dennis Lee, Ronald Cornet, Francis Lau, Nicolette F. de Keizer
2012· article· en· Journal of Biomedical Informatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
152
citations
affunlabeled
Automated ICD-9 Coding via A Deep Learning Approach
Min Li, Zhihui Fei, Min Zeng, Fang‐Xiang Wu, Yaohang Li, Yi Pan +1 more
2018· article· en· IEEE/ACM Transactions on Computational Biology and Bioinformatics· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
145
citations
afffundunlabeled
Analysis of repeated events
Richard J. Cook, Jerald F. Lawless
2002· review· en· Statistical Methods in Medical Research· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
143
citations
afffundunlabeled
Combining classifiers for robust PICO element detection
Florian Boudin, Jian‐Yun Nie, Joan C. Bartlett, Roland Grad, Pierre Pluye, Martin Dawes
2010· article· en· BMC Medical Informatics and Decision Making· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · metaresearchconsensus · none
140
citations
affno abstractunlabeled
Phenotype ontologies: the bridge between genomics and evolution
Paula Mabee, Michael Ashburner, Quentin Cronk, Georgios V. Gkoutos, Melissa Haendel, Erik Segerdell +2 more
2007· article· en· Trends in Ecology & Evolution· Biochemistry, Genetics and Molecular Biology
machine prediction:candidate · noneconsensus · none
137
citations

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