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Record W2530827738 · doi:10.11613/bm.2016.035

IMPACT Observatory: tracking the evolution of clinical trial data sharing and research integrity

2016· review· en· W2530827738 on OpenAlexaff
Karmela Krleža-Jerić, Mirko Gabelica, Rita Banzi, Marina Krnić-Martinić, Bibiana Pulido, Mersiha Mahmić-Kaknjo, Ludovic Reverie, Josip Šimić, Ana Utrobičić, Irena Hrgović

Bibliographic record

VenueBiochemia Medica · 2016
Typereview
Languageen
FieldComputer Science
TopicResearch Data Management Practices
Canadian institutionsUniversité de MontréalComputer Research Institute of Montréal
FundersFP7 People: Marie-Curie ActionsEuropean Commission
KeywordsData sharingClinical trialBusinessProcess (computing)Psychological interventionOpen dataData integrityMedicinePublic relationsPolitical scienceKnowledge managementComputer scienceComputer securityAlternative medicineNursingWorld Wide Web

Abstract

fetched live from OpenAlex

INTRODUCTION: The opening of research data is emerging thanks to the increasing possibilities of digital technology. The opening of clinical trial (CT) data is a part of this process, expected to have positive scientific, ethical, health, and economic impacts thus contributing to research integrity. The January 2016 proposal by the International Council of Medical Journal Editors triggered ample discussion about CT data sharing and reconfirmed the need for an ongoing assessment of its dynamics. The IMProving Access to Clinical Trials data (IMPACT) Observatory aims to play such a role, and assess the data sharing culture, policies, and practices of key players, the impact of their interventions on CTs, and contribute to a transformation of research. The objective of this paper is to present the IMPACT Observatory as well as share some of its preliminary findings. MATERIALS AND METHODS: Methods include a scoping study of research, surveys, interviews, and an environmental scan of research data repositories. RESULTS: Our preliminary findings indicate that although opening of CT data has not yet been achieved, its evolution is encouraging. Initiatives by key players contribute to increasing of CT data sharing, and many barriers are shrinking or disappearing. CONCLUSIONS: The major barrier is the lack of data sharing standards, from preparing data for public sharing to its curatorship, findability and access. However, experiences accumulated by sharing CT data according to "upon request" or "open" mechanisms could inform the development of such standards. The Vivli, CORBEL-ECRIN and Open Trials projects are currently working in this direction.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Direct model labels (unvalidated)

Per-model category and study-design labels from the labeling rounds. They are machine output, unvalidated, and the disagreement between models ships as data. No study design here is MEDLINE-validated yet.

Model armCategoriesStudy designConfidence
gemmaMetaresearchResearch integrity
Domain: Reproducibility · Genre: Review
About the Canadian research system: no · About a Canadian topic: no
Observationallow
gptMetaresearchOpen scienceResearch integrity
Domain: Reproducibility · Genre: Review
About the Canadian research system: no · About a Canadian topic: no
Observationallow
models splitAgreement compares identical category sets and study designs across arms.

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.479
metaresearch head score (Gemma)0.639
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Research integrity
Consensus categoriesMetaresearch
DomainCandidate signal: Reproducibility · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.997
Threshold uncertainty score0.642

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.4790.639
Meta-epidemiology (narrow)0.0010.002
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0230.030
Science and technology studies0.0060.007
Scholarly communication0.0190.022
Open science0.0050.028
Research integrity0.0030.005
Insufficient payload (model declined to judge)0.0070.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.799
GPT teacher head0.630
Teacher spread0.169 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Labeled directly by 2 models reading the full record.

MetaresearchResearch integrityOpen science

The models disagree on parts of this classification; every voice is preserved in the section at the end of the page.

Study designObservational
DomainReproducibility
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations19
Published2016
Admission routes1
Has abstractyes

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